Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_29562158_29573580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29562158 - 29573580

Intron Length:

11423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAATT

5'SS Class:

major

3'SS Sequence:

TGCCTTTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AGATTTTAAACA

Flanking Amino Acid:

ESKNMLQALEDLEVASLTRA

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

78.3

36.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.6

0.71

0.8

75.8

32.8

Minor 5ss

40.7

-1

3.1

55.2

42.8

Minor BPS

54.8

0.15

1.6

62.67

37.6

Associated Gene:

Gene:

EVC2

Ensembl Gene ID:

ENSAPLG00000004238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034316

29542582 - 29608420

65839

ENSAPLT00000004359

29542582 - 29608420

65839