Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_29693413_29719267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29693413 - 29719267

Intron Length:

25855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTATTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATTTCCTTATTT

Flanking Amino Acid:

DYLQRYHIIHRDIKPDNILL

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.7

0.8

75.8

32.4

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

77.1

0.93

1.5

90.41

33.6

Associated Gene:

Gene:

STK32B

Ensembl Gene ID:

ENSAPLG00000004217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004327

29639919 - 29813648

173730