Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_29966822_29968494_R

Intron Information:

Intron Rank:

143840

Intron Class:

major

Intron Phase:

Intron Coordinates:

29966822 - 29968494

Intron Length:

1673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAAA

5'SS Class:

major

3'SS Sequence:

ATTCCATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATTATTCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

68.4

38.1

Major BPS

75.9

0.64

66.1

40.5

Major PPT

79.8

0.67

0.9

70.4

39.7

Minor 5ss

29.9

-2.3

3.3

39.1

46.3

Minor BPS

46.7

-0.1

2.1

70.19

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024695

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018755

29966530 - 29971076

4547

ENSAPLT00000037184

29966530 - 29971076

4547