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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30026543_30030587_F

Intron Information:

Intron Rank:

150440

Intron Class:

major

Intron Phase:

Intron Coordinates:

30026543 - 30030587

Intron Length:

4045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTACTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TAACCTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.3

32.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

83.9

0.76

0.8

80.9

36.6

Minor 5ss

33.3

-1.9

2.9

41.3

44.8

Minor BPS

64.2

0.44

1.4

68.7

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036420

30022503 - 30032851

10349