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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30050776_30071394_F

Intron Information:

Intron Rank:

140800

Intron Class:

major

Intron Phase:

Intron Coordinates:

30050776 - 30071394

Intron Length:

20619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAACATTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.8

0.92

0.7

26.5

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

52.4

0.16

1.9

75.04

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017647

30050694 - 30072426

21733