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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30139735_30141115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30139735 - 30141115

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTTTTCATT

Flanking Amino Acid:

ADAIHQLRTEAHKDVQSAQV

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

100

1.24

0.5

100

Major PPT

91.5

0.93

0.7

89.9

24.7

Minor 5ss

38.1

-1.3

49.1

46.7

Minor BPS

60.5

0.41

1.7

78.3

39.3

Associated Gene:

Gene:

STX18

Ensembl Gene ID:

ENSAPLG00000003942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004053

30095828 - 30159417

63590

ENSAPLT00000018341

30095828 - 30159572

63745