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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30141194_30141310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30141194 - 30141310

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTAGT

5'SS Class:

major

3'SS Sequence:

ATATCTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

ATATCTTGAACA

Flanking Amino Acid:

VLDFIEDYLKRVCKLYSEQR

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

77.2

37.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

66.5

0.37

1.1

62.5

42.4

Minor 5ss

45.3

-0.5

2.6

59.8

Minor BPS

0.62

1.3

75.86

34.7

Associated Gene:

Gene:

STX18

Ensembl Gene ID:

ENSAPLG00000003942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018341

30095828 - 30159572

63745

ENSAPLT00000004053

30095828 - 30159417

63590