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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30145124_30149330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30145124 - 30149330

Intron Length:

4207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

GGTTCTTGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAA

U12 Branch Point Sequence:

ATTGTCTCAAGC

Flanking Amino Acid:

EEKLSSEESKDRGLPDAQSN

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

0.45

1.2

71.6

36.4

Major PPT

74.5

0.55

68.3

42.2

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

49.7

-0

1.9

64.27

41.6

Associated Gene:

Gene:

STX18

Ensembl Gene ID:

ENSAPLG00000003942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018341

30095828 - 30159572

63745

ENSAPLT00000004053

30095828 - 30159417

63590