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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30149420_30156478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30149420 - 30156478

Intron Length:

7059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TGAACTCTAACA

Flanking Amino Acid:

DELSPEEIQMFEQENQRLVG

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

81.6

0.71

0.7

75.8

26.2

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

0.18

1.7

66.92

38.8

Associated Gene:

Gene:

STX18

Ensembl Gene ID:

ENSAPLG00000003942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018341

30095828 - 30159572

63745

ENSAPLT00000004053

30095828 - 30159417

63590