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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30157631_30159321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30157631 - 30159321

Intron Length:

1691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTCTCCTCACAG

Flanking Amino Acid:

IKEGNEDIREAIKNNAGFRV

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

35.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

81.7

0.71

0.7

75.9

26.2

Minor 5ss

39.4

-1.2

3.3

57.2

Minor BPS

49.4

-0.1

60.81

46.6

Associated Gene:

Gene:

STX18

Ensembl Gene ID:

ENSAPLG00000003942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018341

30095828 - 30159572

63745

ENSAPLT00000004053

30095828 - 30159417

63590