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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30208067_30208145_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
30208067 - 30208145

Intron Length:
79

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATGCCTC

5'SS Class:
strong_major

3'SS Sequence:
CACATTTTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
GTCATTTTAATC

Flanking Amino Acid:
KPHLCDICGRGFSNFSNLKE

Intron Amino Acid Position:
488

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.9
0.73
1
68.8
42.3

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
73.4
0.53
0.9
65.2
40.7

Minor 5ss
48.5
-0.1
2.8
67.7
43.5

Minor BPS
60.3
0.3
1.3
62.79
37.3

Associated Gene:

Gene:
ZBTB49

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30205254 - 30223132
17879

30205254 - 30222005
16752