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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30227135_30228009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30227135 - 30228009

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTGCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTTAT

U12 Branch Point Sequence:

TTTTCCTGCACA

Flanking Amino Acid:

NIPRKKAKFQNWMKNSLRIT

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

64.7

0.37

1.2

55.4

41.7

Major PPT

80.3

0.68

0.9

76.1

32.5

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

68.9

0.59

1.9

84.45

35.5

Associated Gene:

Gene:

LYAR

Ensembl Gene ID:

ENSAPLG00000003243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044882

30223838 - 30234344

10507

ENSAPLT00000034608

30223580 - 30230614

7035

ENSAPLT00000003315

30223838 - 30239854

16017