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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30228094_30228692_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30228094 - 30228692

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGAACAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TGTCTTTGAACA

Flanking Amino Acid:

WDIFSEATRDVSSKKELDKS

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

82.3

25.5

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

54.8

0.11

1.1

54.7

38.4

Minor 5ss

41.9

-0.9

2.8

53.7

43.8

Minor BPS

61.1

0.34

1.4

70.24

35.4

Associated Gene:

Gene:

LYAR

Ensembl Gene ID:

ENSAPLG00000003243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044882

30223838 - 30234344

10507

ENSAPLT00000034608

30223580 - 30230614

7035

ENSAPLT00000003315

30223838 - 30239854

16017