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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30230384_30230712_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30230384 - 30230712

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGTAG

5'SS Class:

major

3'SS Sequence:

TTTCTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TCTTTACTAACT

Flanking Amino Acid:

EISIKKLRKKVIAQYYAVAG

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

61.6

39.4

Major BPS

76.8

0.67

0.9

75.9

Major PPT

87.3

0.84

0.8

84.2

30.7

Minor 5ss

41.5

-0.9

3.2

54.5

49.7

Minor BPS

0.36

1.9

81.5

39.9

Associated Gene:

Gene:

LYAR

Ensembl Gene ID:

ENSAPLG00000003243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044882

30223838 - 30234344

10507

ENSAPLT00000003315

30223838 - 30239854

16017