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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30256092_30259455_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30256092 - 30259455

Intron Length:

3364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAC

5'SS Class:

strong_major

3'SS Sequence:

TCGTTTAACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATTCGTTTAACT

Flanking Amino Acid:

VTHAAHTILQVYFLWCHAKD

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

71.9

31.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

67.6

0.4

0.9

67.1

38.3

Minor 5ss

30.1

-2.3

3.4

40.8

45.7

Minor BPS

66.8

0.61

1.7

83.73

37.1

Associated Gene:

Gene:

OTOP1

Ensembl Gene ID:

ENSAPLG00000003029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003065

30251979 - 30265400

13422