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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30261633_30263918_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30261633 - 30263918

Intron Length:

2286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTCCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ACATATGTAATC

Flanking Amino Acid:

ITLGFGNITIVLDDHAPQCN

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.2

30.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

78.6

0.64

0.7

76.9

25.2

Minor 5ss

43.2

-0.8

2.9

55.3

48.9

Minor BPS

45.5

-0.3

2.1

53.95

38.4

Associated Gene:

Gene:

OTOP1

Ensembl Gene ID:

ENSAPLG00000003029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003065

30251979 - 30265400

13422