Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_30414756_30419930_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30414756 - 30419930

Intron Length:

5175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CATTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTATACTAACA

Flanking Amino Acid:

MKEKVLKKKLNWSGSLIVAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

100

1.24

0.5

100

Major PPT

83.5

0.75

0.8

80.5

36.7

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

49.2

-0

1.9

66.99

38.6

Associated Gene:

Gene:

SLC2A9

Ensembl Gene ID:

ENSAPLG00000001225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024639

30315565 - 30440144

124580

ENSAPLT00000001361

30315565 - 30442111

126547