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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30420014_30424677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

30420014 - 30424677

Intron Length:

4664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

GCTGCCACAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

58.2

0.2

1.1

49.1

Major PPT

86.5

0.82

0.6

85.2

22.1

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

49.6

0.05

70.09

46.2

Associated Gene:

Gene:

SLC2A9

Ensembl Gene ID:

ENSAPLG00000001225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024639

30315565 - 30440144

124580