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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30420014_30440107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

30420014 - 30440107

Intron Length:

20094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

GCTGCCACAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

58.2

0.2

1.1

49.1

Major PPT

86.5

0.82

0.6

85.2

22.1

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

49.6

0.05

70.09

46.2

Associated Gene:

Gene:

SLC2A9

Ensembl Gene ID:

ENSAPLG00000001225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001361

30315565 - 30442111

126547