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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30477588_30478423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30477588 - 30478423

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

CCATCAATAATT

Flanking Amino Acid:

NPNKPLRVIKGHSKSIQCLT

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

76.9

0.67

66.3

40.4

Major PPT

77.4

0.62

0.8

71.6

31.8

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

49.5

0.04

1.9

66.85

43.8

Associated Gene:

Gene:

WDR1

Ensembl Gene ID:

ENSAPLG00000016176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029506

30470901 - 30490303

19403

ENSAPLT00000027319

30469191 - 30490303

21113

ENSAPLT00000016892

30469191 - 30490109

20919

ENSAPLT00000037423

30462868 - 30490109

27242