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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30478658_30478775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30478658 - 30478775

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TTTGCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTTGCTTTTACA

Flanking Amino Acid:

GKAHDGGIYAISWSPDSSQL

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

89.1

0.88

0.7

83.7

31.3

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

66.7

0.52

1.7

78.96

37.6

Associated Gene:

Gene:

WDR1

Ensembl Gene ID:

ENSAPLG00000016176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016892

30469191 - 30490109

20919

ENSAPLT00000037423

30462868 - 30490109

27242

ENSAPLT00000029506

30470901 - 30490303

19403

ENSAPLT00000027319

30469191 - 30490303

21113