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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30479662_30481493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30479662 - 30481493

Intron Length:

1832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTTTT

5'SS Class:

major

3'SS Sequence:

CTCTTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CTAGTCTCATCT

Flanking Amino Acid:

PPFKFKFTLSDHTRFVNCVR

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

76.9

34.5

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

88.1

0.86

0.7

83.3

25.3

Minor 5ss

42.7

-0.8

45.5

Minor BPS

47.1

-0.1

1.9

64.24

46.1

Associated Gene:

Gene:

WDR1

Ensembl Gene ID:

ENSAPLG00000016176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029506

30470901 - 30490303

19403

ENSAPLT00000027319

30469191 - 30490303

21113

ENSAPLT00000016892

30469191 - 30490109

20919

ENSAPLT00000037423

30462868 - 30490109

27242