Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_30556992_30557090_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30556992 - 30557090

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAAAAAT

5'SS Class:

major

3'SS Sequence:

AAAAGGAAGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTGTTTGAAAA

Flanking Amino Acid:

TKGWDVLSLPVKTLHEKFST

Intron Amino Acid Position:

1081

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.1

68.1

36.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

45.2

-0.2

1.1

40.1

Minor 5ss

36.7

-1.5

3.2

54.6

43.5

Minor BPS

54.6

0.14

1.6

68.73

37.7

Associated Gene:

Gene:

ZNF518B

Ensembl Gene ID:

ENSAPLG00000018252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035912

30553546 - 30557165

3620