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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30568381_30572311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30568381 - 30572311

Intron Length:

3931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

IQSSKDVCSSGPTLNVEDVS

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

73.1

0.58

79.6

29.1

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

CLNK

Ensembl Gene ID:

ENSAPLG00000030089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024489

30561586 - 30611174

49589