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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30580706_30581404_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30580706 - 30581404

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TTGACTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAC

U12 Branch Point Sequence:

TCTCCTTTGACT

Flanking Amino Acid:

IHGPQPFPPPRPLKTLPKQY

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.3

32.1

Major BPS

69.3

0.48

1.1

39.5

Major PPT

80.3

0.68

0.9

77.6

36.6

Minor 5ss

37.7

-1.4

3.1

48.1

47.5

Minor BPS

74.6

0.86

1.2

84.49

36.3

Associated Gene:

Gene:

CLNK

Ensembl Gene ID:

ENSAPLG00000030089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024489

30561586 - 30611174

49589