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Intron Name: Anas_platyrhynchos_platyrhynchos_4_30594117_30611125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30594117 - 30611125

Intron Length:

17009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCAATTGTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

CTTTGTTCAATT

Flanking Amino Acid:

MEANRKTRVQC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

66.2

0.36

1.1

65.2

45.2

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

54.4

0.22

75.4

42.3

Associated Gene:

Gene:

CLNK

Ensembl Gene ID:

ENSAPLG00000030089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024489

30561586 - 30611174

49589