Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_31087956_31089079_R

Intron Information:

Intron Rank:

148826

Intron Class:

major

Intron Phase:

Intron Coordinates:

31087956 - 31089079

Intron Length:

1124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGAAAA

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTTGTTTTGAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.3

68.2

38.6

Major BPS

65.7

0.39

71.3

30.3

Major PPT

75.1

0.56

1.1

75.7

37.8

Minor 5ss

34.7

-1.7

45.1

42.9

Minor BPS

53.4

-0

1.6

62.4

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046687

31075750 - 31089129

13380