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Intron Name: Anas_platyrhynchos_platyrhynchos_4_31508590_31511470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31508590 - 31511470

Intron Length:

2881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTTTTTCCCGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGATTTAATT

Flanking Amino Acid:

HFVSAKTGDSVFLCFQRIAA

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.7

0.78

0.6

81.9

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

62.3

0.46

1.6

77.31

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029370

31453106 - 31565712

112607

ENSAPLT00000047774

31500908 - 31565712

64805

ENSAPLT00000015710

31500908 - 31565712

64805

ENSAPLT00000046985

31502179 - 31565712

63534

ENSAPLT00000035532

31506074 - 31565712

59639

ENSAPLT00000029547

31508323 - 31565712

57390