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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3154566_3207912_F

Intron Information:

Intron Rank:

148524

Intron Class:

major

Intron Phase:

Intron Coordinates:

3154566 - 3207912

Intron Length:

53347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TCCACCTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

88.6

0.87

0.7

81.3

36.4

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

67.2

0.4

1.5

63.64

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023703

3152213 - 3208079

55867