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Intron Name: Anas_platyrhynchos_platyrhynchos_4_31589814_31590108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31589814 - 31590108

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCC

5'SS Class:

major

3'SS Sequence:

GCCCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

CCCGCCGTGACC

Flanking Amino Acid:

SDSEMSAAVSDRSPPEEEDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

69.7

36.5

Major BPS

48.6

-0

1.2

40.4

Major PPT

64.6

0.33

0.9

57.1

33.4

Minor 5ss

29.4

-2.4

3.6

41.9

45.1

Minor BPS

-0.3

2.2

52.61

45.8

Associated Gene:

Gene:

NKX3-2

Ensembl Gene ID:

ENSAPLG00000027777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029297

31588335 - 31590358

2024