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Intron Name: Anas_platyrhynchos_platyrhynchos_4_31614466_31616098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31614466 - 31616098

Intron Length:

1633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

ATTTTGTTATAT

Flanking Amino Acid:

TRPATRLEAQRKQPSKPTTR

Intron Amino Acid Position:

2913

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.1

81.5

32.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

86.8

0.83

0.8

35.3

Minor 5ss

41.8

-0.9

3.2

58.1

46.5

Minor BPS

48.6

-0

2.3

75.05

41.7

Associated Gene:

Gene:

BOD1L1

Ensembl Gene ID:

ENSAPLG00000024618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045054

31612458 - 31646800

34343

ENSAPLT00000018077

31612458 - 31646800

34343