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Intron Name: Anas_platyrhynchos_platyrhynchos_4_31616253_31619824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31616253 - 31619824

Intron Length:

3572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTACATGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

AAAATTTTACAT

Flanking Amino Acid:

FASKGKSPQTETLEPERKRR

Intron Amino Acid Position:

2822

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

65.8

0.36

1.1

62.4

43.3

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

46.1

-0.2

1.6

58.05

38.4

Associated Gene:

Gene:

BOD1L1

Ensembl Gene ID:

ENSAPLG00000024618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045054

31612458 - 31646800

34343