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Intron Name: Anas_platyrhynchos_platyrhynchos_4_31623545_31624191_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31623545 - 31624191

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTTCA

5'SS Class:

major

3'SS Sequence:

CAAAACAATGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TGTTTCAAAACA

Flanking Amino Acid:

CSETKPINTKEVTSGDTAEV

Intron Amino Acid Position:

2717

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

72.2

33.2

Major BPS

68.1

0.45

73.5

28.6

Major PPT

53.8

0.09

1.1

44.8

40.6

Minor 5ss

46.6

-0.3

2.4

59.8

44.6

Minor BPS

55.6

0.17

1.9

72.69

39.1

Associated Gene:

Gene:

BOD1L1

Ensembl Gene ID:

ENSAPLG00000024618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045054

31612458 - 31646800

34343

ENSAPLT00000018077

31612458 - 31646800

34343