Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_31641311_31642567_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31641311 - 31642567

Intron Length:

1257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAACAA

5'SS Class:

major

3'SS Sequence:

ACCAACTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

ATTTCACCAACT

Flanking Amino Acid:

STEEGEITSDDEEAKNNQSK

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

62.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

68.9

0.42

57.8

42.2

Minor 5ss

30.8

-2.2

3.1

35.6

42.2

Minor BPS

53.1

0.18

2.1

81.43

39.3

Associated Gene:

Gene:

BOD1L1

Ensembl Gene ID:

ENSAPLG00000024618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045054

31612458 - 31646800

34343

ENSAPLT00000018077

31612458 - 31646800

34343