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Intron Name: Anas_platyrhynchos_platyrhynchos_4_31853053_31858038_F

Intron Information:

Intron Rank:

136334

Intron Class:

major

Intron Phase:

Intron Coordinates:

31853053 - 31858038

Intron Length:

4986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTAT

5'SS Class:

major

3'SS Sequence:

CCCTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCTAT

U12 Branch Point Sequence:

CTATCAGTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

68.7

38.6

Major BPS

0.37

1.3

64.5

42.5

Major PPT

84.4

0.77

0.7

79.7

25.8

Minor 5ss

37.4

-1.4

3.5

55.6

48.6

Minor BPS

-0.4

2.5

65.41

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019069

31818726 - 31858064

39339

ENSAPLT00000017837

31852163 - 31871120

18958