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Intron Name: Anas_platyrhynchos_platyrhynchos_4_31869686_31870233_F

Intron Information:

Intron Rank:

136336

Intron Class:

major

Intron Phase:

Intron Coordinates:

31869686 - 31870233

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTCTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

86.5

28.6

Major BPS

81.6

0.78

0.8

24.9

Major PPT

80.7

0.69

0.8

75.9

32.8

Minor 5ss

39.5

-1.2

3.1

58.2

Minor BPS

62.9

0.48

1.5

80.46

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017837

31852163 - 31871120

18958