Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_32112603_32113081_R

Intron Information:

Intron Rank:

145713

Intron Class:

major

Intron Phase:

Intron Coordinates:

32112603 - 32113081

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGTGTATA

5'SS Class:

strong_major

3'SS Sequence:

TATGTGCCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

ATGACTGGAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

84.9

26.3

Major BPS

62.6

0.31

59.1

37.6

Major PPT

69.9

0.45

0.9

63.2

39.2

Minor 5ss

-1.1

2.7

50.4

46.1

Minor BPS

44.4

-0.4

54.94

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023508

32110031 - 32113502

3472