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Intron Name: Anas_platyrhynchos_platyrhynchos_4_32310621_32312400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32310621 - 32312400

Intron Length:

1780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTGTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGTCTTTATTT

Flanking Amino Acid:

RKTEVSLDEVSDSDKFREMQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.4

37.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.5

0.78

0.9

80.9

36.4

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

69.5

0.69

1.5

83.25

38.8

Associated Gene:

Gene:

CC2D2A

Ensembl Gene ID:

ENSAPLG00000005264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033800

32301417 - 32359601

58185

ENSAPLT00000025504

32301417 - 32360251

58835

ENSAPLT00000005494

32309988 - 32359601

49614

ENSAPLT00000040052

32300632 - 32359601

58970

ENSAPLT00000038372

32301417 - 32359601

58185