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Intron Name: Anas_platyrhynchos_platyrhynchos_4_32333529_32334179_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32333529 - 32334179

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATCTAATT

Flanking Amino Acid:

NNAALMQMIMVATSGEAHVP

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.9

0.52

0.9

71.8

38.1

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

63.1

0.49

1.8

85.6

34.5

Associated Gene:

Gene:

CC2D2A

Ensembl Gene ID:

ENSAPLG00000005264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038372

32301417 - 32359601

58185

ENSAPLT00000033800

32301417 - 32359601

58185

ENSAPLT00000025504

32301417 - 32360251

58835

ENSAPLT00000005494

32309988 - 32359601

49614

ENSAPLT00000040052

32300632 - 32359601

58970