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Intron Name: Anas_platyrhynchos_platyrhynchos_4_32345210_32348207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32345210 - 32348207

Intron Length:

2998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

GGACAGTTGATA

Flanking Amino Acid:

PFTTIYFQAKIDGTFKVDIP

Intron Amino Acid Position:

1045

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

85.3

32.2

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

70.9

0.47

65.2

41.1

Minor 5ss

43.9

-0.7

2.9

60.2

44.5

Minor BPS

41.5

-0.6

2.1

47.19

35.9

Associated Gene:

Gene:

CC2D2A

Ensembl Gene ID:

ENSAPLG00000005264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005494

32309988 - 32359601

49614

ENSAPLT00000040052

32300632 - 32359601

58970

ENSAPLT00000038372

32301417 - 32359601

58185

ENSAPLT00000033800

32301417 - 32359601

58185

ENSAPLT00000025504

32301417 - 32360251

58835