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Intron Name: Anas_platyrhynchos_platyrhynchos_4_32348385_32350573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32348385 - 32350573

Intron Length:

2189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTACC

5'SS Class:

strong_major

3'SS Sequence:

AATCTCTATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CCTTCCTGAATC

Flanking Amino Acid:

LVPGESVREKMNEMLKKFDT

Intron Amino Acid Position:

1183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

78.8

35.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

68.8

0.42

0.9

62.7

37.9

Minor 5ss

42.5

-0.8

2.5

55.6

41.5

Minor BPS

67.8

0.54

1.5

70.86

Associated Gene:

Gene:

CC2D2A

Ensembl Gene ID:

ENSAPLG00000005264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040052

32300632 - 32359601

58970

ENSAPLT00000038372

32301417 - 32359601

58185

ENSAPLT00000033800

32301417 - 32359601

58185