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Intron Name: Anas_platyrhynchos_platyrhynchos_4_32431541_32443400_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
32431541 - 32443400

Intron Length:
11860

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTGAGTGGT

5'SS Class:
strong_major

3'SS Sequence:
TTTTATATTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TACTAATTAACT

Flanking Amino Acid:
SYLAERHPALGRDTDCLKIW

Intron Amino Acid Position:
76

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
1
72.2
39.5

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
88.1
0.86
0.8
86
32.8

Minor 5ss
28.5
-2.5
3.1
31.8
42.6

Minor BPS
62.9
0.48
1.8
79.78
41.5

Associated Gene:

Gene:
CD38

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32431314 - 32451995
20682