Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_32449970_32451907_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32449970 - 32451907

Intron Length:

1938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTATCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATGT

Flanking Amino Acid:

NFTITCEDNYRPVQLLQCVR

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

78.1

36.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.4

0.71

0.9

40.4

Minor 5ss

38.8

-1.3

53.4

43.7

Minor BPS

55.4

0.25

1.9

75.72

41.5

Associated Gene:

Gene:

CD38

Ensembl Gene ID:

ENSAPLG00000006255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006498

32431314 - 32451995

20682