Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_32498646_32498866_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

32498646 - 32498866

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TAATTATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTCCTGACTT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

77.9

38.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.4

0.66

0.9

70.5

44.2

Minor 5ss

40.6

-1

2.9

49.4

46.6

Minor BPS

69.4

0.69

1.7

88.83

36.2

Associated Gene:

Gene:

PROM1

Ensembl Gene ID:

ENSAPLG00000006442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034810

32497183 - 32553140

55958

ENSAPLT00000030515

32497183 - 32553140

55958

ENSAPLT00000028437

32497183 - 32553140

55958