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Intron Name: Anas_platyrhynchos_platyrhynchos_4_32504624_32504697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32504624 - 32504697

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

GTTCACTTACTT

Flanking Amino Acid:

NNNASLVIVQETKKYMDTIV

Intron Amino Acid Position:

738

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

79.3

0.66

0.9

77.1

37.1

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

55.8

0.26

1.8

75.41

41.1

Associated Gene:

Gene:

PROM1

Ensembl Gene ID:

ENSAPLG00000006442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028437

32497183 - 32553140

55958

ENSAPLT00000027947

32501660 - 32553140

51481

ENSAPLT00000022868

32498867 - 32553140

54274

ENSAPLT00000034810

32497183 - 32553140

55958

ENSAPLT00000006705

32498867 - 32553140

54274

ENSAPLT00000030515

32497183 - 32553140

55958