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Intron Name: Anas_platyrhynchos_platyrhynchos_4_32506349_32507076_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32506349 - 32507076

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAATAT

5'SS Class:

major

3'SS Sequence:

ACTGACTGTCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTACAAAACT

Flanking Amino Acid:

QQVVPLEQAMKYVKARSTLN

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

72.8

32.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

53.2

0.07

1.2

49.1

43.4

Minor 5ss

39.1

-1.2

3.3

52.6

45.6

Minor BPS

0.33

2.1

86.2

39.4

Associated Gene:

Gene:

PROM1

Ensembl Gene ID:

ENSAPLG00000006442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028437

32497183 - 32553140

55958

ENSAPLT00000027947

32501660 - 32553140

51481

ENSAPLT00000022868

32498867 - 32553140

54274

ENSAPLT00000006705

32498867 - 32553140

54274

ENSAPLT00000034810

32497183 - 32553140

55958