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Intron Name: Anas_platyrhynchos_platyrhynchos_4_32643158_32659536_F

Intron Information:

Intron Rank:

130305

Intron Class:

major

Intron Phase:

Intron Coordinates:

32643158 - 32659536

Intron Length:

16379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TGTCCAATGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.4

Major BPS

68.8

0.47

1.2

63.4

Major PPT

83.8

0.76

0.7

80.7

24.6

Minor 5ss

44.2

-0.6

3.1

60.1

38.6

Minor BPS

49.6

-0

1.9

67.75

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030195

32643063 - 32675619

32557