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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3271089_3271855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3271089 - 3271855

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGTAA

5'SS Class:

major

3'SS Sequence:

TTTTTCTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGCTTTTTATT

Flanking Amino Acid:

LRRALSGLSARWKNWWIRGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

66.9

34.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.4

0.82

0.9

84.7

30.1

Minor 5ss

41.5

-0.9

3.2

54.8

49.4

Minor BPS

54.5

0.22

1.6

72.15

39.3

Associated Gene:

Gene:

CDS1

Ensembl Gene ID:

ENSAPLG00000003109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033126

3264258 - 3290504

26247

ENSAPLT00000003172

3270552 - 3290504

19953