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Intron Name: Anas_platyrhynchos_platyrhynchos_4_32734828_32736436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32734828 - 32736436

Intron Length:

1609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAAAAT

U12 Branch Point Sequence:

AAAGTGAAAATT

Flanking Amino Acid:

LVPRSILAMHAQDPQVLEQL

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

55.4

0.14

1.3

61.7

41.5

Major PPT

73.5

0.53

0.9

72.5

37.7

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

35.5

-1

2.2

48.38

38.7

Associated Gene:

Gene:

LDB2

Ensembl Gene ID:

ENSAPLG00000007630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027126

32689411 - 33061505

372095

ENSAPLT00000023838

32689411 - 33061505

372095

ENSAPLT00000007945

32682963 - 32905918

222956