Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_32736560_32741484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32736560 - 32741484

Intron Length:

4925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGGG

5'SS Class:

major

3'SS Sequence:

TTATGTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATGCATT

Flanking Amino Acid:

TQHGKPMFTKVCTEGRLILE

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.2

60.8

44.4

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

75.1

0.57

0.9

67.2

43.5

Minor 5ss

35.4

-1.7

3.4

47.6

47.9

Minor BPS

49.3

0.02

2.1

76.66

39.8

Associated Gene:

Gene:

LDB2

Ensembl Gene ID:

ENSAPLG00000007630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023838

32689411 - 33061505

372095

ENSAPLT00000007945

32682963 - 32905918

222956

ENSAPLT00000027126

32689411 - 33061505

372095